Transcript: CD81-AS1:5

Basic information

LNCipedia transcript ID: CD81-AS1:5 
LNCipedia gene ID: CD81-AS1
Location (hg19): chr11:2398846-2399227
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 382 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000238184.1|MICT00000053251.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.8502 non-coding 
CPAT coding probability 4.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CD81-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CD81-AS1:5
5.0 CD81-AS1:5
5.1 CD81-AS1:5
5.2 CD81-AS1:5