Transcript: CDH18-AS1:4

Basic information

LNCipedia transcript ID: CDH18-AS1:4 
LNCipedia gene ID: CDH18-AS1
Location (hg19): chr5:20305471-20331928
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 990 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT100700
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.6617 non-coding 
CPAT coding probability 63.39% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CDH18-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BASP1-8:2
4.0 lnc-BASP1-8:2
4.1 lnc-BASP1-8:2
5.0 lnc-BASP1-8:2
5.1 CDH18-AS1:2
5.2 CDH18-AS1:4