Transcript: CDKN2A-DT:5

Basic information

LNCipedia transcript ID: CDKN2A-DT:5 
LNCipedia gene ID: CDKN2A-DT
RefSeq ID: NR_024274
Location (hg19): chr9:21967138-21967753
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 616 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024274; NR_024274.1
Alternative gene names: bA149I2.3; CDKN2A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.8347 non-coding 
CPAT coding probability 10.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CDKN2A-DT:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf53-3:1
4.0 CDKN2A-AS1:2
4.1 CDKN2A-AS1:2
5.0 CDKN2A-AS1:2
5.1 CDKN2A-DT:3
5.2 CDKN2A-DT:5