Transcript: CFLAR-AS1:3

Basic information

LNCipedia transcript ID: CFLAR-AS1:3 
LNCipedia gene ID: CFLAR-AS1
Location (hg19): chr2:202005012-202022515
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 307 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT076373
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -220.3677 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CFLAR-AS1:3 no no no no

Available literature

  1. Hu (2016), Three Circulating LncRNA Predict Early Progress of Esophageal Squamous Cell Carcinoma., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM126B-2:4
4.0 CFLAR-AS1:3
4.1 CFLAR-AS1:3
5.0 CFLAR-AS1:3
5.1 CFLAR-AS1:3
5.2 CFLAR-AS1:3