Transcript: CFLAR-AS1:30

Basic information

LNCipedia transcript ID: CFLAR-AS1:30 
LNCipedia gene ID: CFLAR-AS1
Location (hg19): chr2:202014189-202015970
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 445 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226312.3|ENST00000598509.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -160.2043 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CFLAR-AS1:30 no no no no

Available literature

  1. Hu (2016), Three Circulating LncRNA Predict Early Progress of Esophageal Squamous Cell Carcinoma., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CFLAR-AS1:30
5.0 CFLAR-AS1:30
5.1 CFLAR-AS1:30
5.2 CFLAR-AS1:30