Transcript: CLRN1-AS1:1
Basic information
LNCipedia transcript ID: CLRN1-AS1:1
HGNC Gene Symbol: CLRN1-AS1
HGNC Full Gene Name:
CLRN1 antisense RNA 1
Ensembl Gene ID:
ENSG00000239265
Ensembl Transcript ID:
ENST00000476886
Location (hg19): chr3:150570271-150798513
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2223 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000476886.1; CLRN1-AS1-001; OTTHUMT00000357695.2; NONHSAT092712; ENST00000476886.5
Alternative gene names: ENSG00000239265.1; CLRN1-AS1; OTTHUMG00000159846.2; ENSG00000239265.5; UCRP
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| CLRN1-AS1:1 | no | no | no | no |
Available literature
- Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
- Joensuu (2001), Mutations in a novel gene with transmembrane domains underlie Usher syndrome type 3., Am. J. Hum. Genet.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-MED12L-1:1 |
| 4.0 | CLRN1-AS1:1 |
| 4.1 | CLRN1-AS1:1 |
| 5.0 | CLRN1-AS1:1 |
| 5.1 | CLRN1-AS1:1 |
| 5.2 | CLRN1-AS1:1 |