Transcript: COX10-AS1:16

Basic information

LNCipedia transcript ID: COX10-AS1:16 
LNCipedia gene ID: COX10-AS1
Location (hg19): chr17:13679960-13682238
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2051 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025565; NONHSAT145731
Alternative gene names: XLOC_012393; linc-HS3ST3A1-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.9703 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HS3ST3A1-2:3
3.1 lnc-HS3ST3A1-4:5
4.0 COX10-AS1:16
4.1 COX10-AS1:16
5.0 COX10-AS1:16
5.1 COX10-AS1:16
5.2 COX10-AS1:16