Transcript: CPNE8-AS1:4

Basic information

LNCipedia transcript ID: CPNE8-AS1:4 
LNCipedia gene ID: CPNE8-AS1
Location (hg19): chr12:39300141-39303322
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 566 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT027691
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.6193 non-coding 
CPAT coding probability 3.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CPNE8-AS1:4 no no no no

Available literature

  1. Zhao (2018), Overexpression of long non-coding RNA RP11-396F22.1 correlates poor prognosis of patients with early-stage cervical cancer., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG10B-1:2
4.0 lnc-ALG10B-1:2
4.1 lnc-ALG10B-1:2
5.0 lnc-ALG10B-1:2
5.1 CPNE8-AS1:2
5.2 CPNE8-AS1:4