Transcript: DBH-AS1:5

Basic information

LNCipedia transcript ID: DBH-AS1:5 
HGNC Gene Symbol: DBH-AS1    
HGNC Full Gene Name: DBH antisense RNA 1
Ensembl Gene ID: ENSG00000225756
Ensembl Transcript ID: ENST00000425189
Location (hg19): chr9:136519708-136522435
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2139 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425189.1; DBH-AS1-001; OTTHUMT00000054928.1
Alternative gene names: ENSG00000225756.1; DBH-AS1; OTTHUMG00000020877.1; BPR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.6169 non-coding 
CPAT coding probability 16.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DBH-AS1:5 yes no no no

Available literature

  1. Huang (2015), HBx-related long non-coding RNA DBH-AS1 promotes cell proliferation and survival by activating MAPK signaling in hepatocellular carcinoma., Oncotarget
  2. Gilbert (2000), Physical and cDNA mapping in the DBH region of human chromosome 9q34., Hum. Hered.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SARDH-1:1
4.0 DBH-AS1:5
4.1 DBH-AS1:5
5.0 DBH-AS1:5
5.1 DBH-AS1:5
5.2 DBH-AS1:5