Transcript: DCST1-AS1:24

Basic information

LNCipedia transcript ID: DCST1-AS1:24 
LNCipedia gene ID: DCST1-AS1
Location (hg19): chr1:155017693-155023641
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1580 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT006670
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.317 non-coding 
CPAT coding probability 18.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DCST1-AS1:24 no no no no

Available literature

  1. Li (2016), Integrated bioinformatics analysis of chromatin regulator EZH2 in regulating mRNA and lncRNA expression by ChIP sequencing and RNA sequencing., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCST2-1:4
4.0 lnc-DCST2-1:4
4.1 lnc-DCST2-1:4
5.0 lnc-DCST2-1:4
5.1 DCST1-AS1:11
5.2 DCST1-AS1:24