Transcript: DIRC3-AS1:2

Basic information

LNCipedia transcript ID: DIRC3-AS1:2 
LNCipedia gene ID: DIRC3-AS1
Location (hg19): chr2:218147407-218182616
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 251 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004026; NONHSAT076858
Alternative gene names: XLOC_001864; linc-RUFY4-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -455.3663 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DIRC3-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC007557.1.1-4:1
3.1 lnc-AC007557.1.1-4:1
4.0 DIRC3-AS1:2
4.1 DIRC3-AS1:2
5.0 DIRC3-AS1:2
5.1 DIRC3-AS1:2
5.2 DIRC3-AS1:2