Transcript: DLGAP1-AS1:3

Basic information

LNCipedia transcript ID: DLGAP1-AS1:3 
LNCipedia gene ID: DLGAP1-AS1
Location (hg19): chr18:3594068-3597384
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 447 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA630:1
Alternative gene names: HsT914; FLJ35776


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -95.2591 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP1-AS1:3 yes no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 DLGAP1-AS1:3
4.1 DLGAP1-AS1:3
5.0 DLGAP1-AS1:3
5.1 DLGAP1-AS1:3
5.2 DLGAP1-AS1:3