Transcript: DLGAP1-AS1:7

Basic information

LNCipedia transcript ID: DLGAP1-AS1:7 
LNCipedia gene ID: DLGAP1-AS1
RefSeq ID: NR_024101
Location (hg19): chr18:3594112-3597377
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 993 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024101; NR_024101.1
Alternative gene names: HsT914; FLJ35776; DLGAP1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.1069 non-coding 
CPAT coding probability 12.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP1-AS1:7 yes no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TGIF1-2:8
4.0 DLGAP1-AS1:7
4.1 DLGAP1-AS1:7
5.0 DLGAP1-AS1:7
5.1 DLGAP1-AS1:7
5.2 DLGAP1-AS1:7