Transcript: DLGAP1-AS2:6

Basic information

LNCipedia transcript ID: DLGAP1-AS2:6 
LNCipedia gene ID: DLGAP1-AS2
Location (hg19): chr18:3604968-3608462
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2125 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT057011
Alternative gene names: MGC11082


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.4089 non-coding 
CPAT coding probability 7.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP1-AS2:6 yes no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002478.1-1:5
4.0 DLGAP1-AS2:6
4.1 DLGAP1-AS2:6
5.0 DLGAP1-AS2:6
5.1 DLGAP1-AS2:6
5.2 DLGAP1-AS2:6