Transcript: DLGAP1-AS3:7

Basic information

LNCipedia transcript ID: DLGAP1-AS3:7 
LNCipedia gene ID: DLGAP1-AS3
Location (hg19): chr18:3876180-3890809
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 435 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263724.1|FTMT27100008637.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -216.7155 non-coding 
CPAT coding probability 2.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLGAP1-AS3:7 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DLGAP1-AS3:7
5.0 DLGAP1-AS3:7
5.1 DLGAP1-AS3:7
5.2 DLGAP1-AS3:7