Transcript: DNAJC27-AS1:13

Basic information

LNCipedia transcript ID: DNAJC27-AS1:13 
LNCipedia gene ID: DNAJC27-AS1
Location (hg19): chr2:25224400-25258424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00003604
Alternative gene names: XLOC_001398; linc-EFR3B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.9302 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DNAJC27-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EFR3B-1:10
3.1 lnc-EFR3B-3:10
4.0 DNAJC27-AS1:13
4.1 DNAJC27-AS1:13
5.0 DNAJC27-AS1:13
5.1 DNAJC27-AS1:13
5.2 DNAJC27-AS1:13