Transcript: DNM3-IT1:1

Basic information

LNCipedia transcript ID: DNM3-IT1:1 
HGNC Gene Symbol: DNM3-IT1    
HGNC Full Gene Name: DNM3 intronic transcript 1
Ensembl Gene ID: ENSG00000233540
Ensembl Transcript ID: ENST00000450800
Location (hg19): chr1:171833327-171833827
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 396 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000450800.1; DNM3-IT1-001; OTTHUMT00000106401.1; NONHSAT007589
Alternative gene names: ENSG00000233540.1; DNM3-IT1; OTTHUMG00000046154.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.6811 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DNM3-IT1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL13-1:1
4.0 DNM3-IT1:1
4.1 DNM3-IT1:1
5.0 DNM3-IT1:1
5.1 DNM3-IT1:1
5.2 DNM3-IT1:1