Transcript: DPH6-DT:22

Basic information

LNCipedia transcript ID: DPH6-DT:22 
HGNC Gene Symbol: DPH6-DT    
HGNC Full Gene Name: DPH6 divergent transcript
Ensembl Gene ID: ENSG00000248079
Ensembl Transcript ID: ENST00000559210
Location (hg19): chr15:35838584-36150504
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 493 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559210.1; RP11-702M1.1-003; OTTHUMT00000418020.1; NONHSAT041632
Alternative gene names: ENSG00000248079.2; RP11-702M1.1; OTTHUMG00000172347.1; DPH6-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.6516 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DPH6-DT:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C15orf41-8:3
4.0 DPH6-AS1:4
4.1 DPH6-AS1:4
5.0 DPH6-AS1:4
5.1 DPH6-DT:12
5.2 DPH6-DT:22