Transcript: DPH6-DT:23

Basic information

LNCipedia transcript ID: DPH6-DT:23 
LNCipedia gene ID: DPH6-DT
Location (hg19): chr15:35840582-35846718
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6137 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT041633; FPKM1_group_9965_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.7381 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DPH6-DT:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C15orf41-8:6
4.0 DPH6-AS1:5
4.1 DPH6-AS1:5
5.0 DPH6-AS1:5
5.1 DPH6-DT:13
5.2 DPH6-DT:23