Transcript: DPP10-AS1:6

Basic information

LNCipedia transcript ID: DPP10-AS1:6 
LNCipedia gene ID: DPP10-AS1
Location (hg19): chr2:115901468-115919623
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1414 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000235026.1|MICT00000197435.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -190.6243 non-coding 
CPAT coding probability 7.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DPP10-AS1:6 no no no no

Available literature

  1. Lin (2017), Long Noncoding RNA BC032913 as a Novel Therapeutic Target for Colorectal Cancer that Suppresses Metastasis by Upregulating TIMP3., Mol Ther Nucleic Acids
  2. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DPP10-AS1:6
5.0 DPP10-AS1:6
5.1 DPP10-AS1:6
5.2 DPP10-AS1:6