Transcript: EDNRB-AS1:2

Basic information

LNCipedia transcript ID: EDNRB-AS1:2 
LNCipedia gene ID: EDNRB-AS1
Location (hg19): chr13:78393072-78482563
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2431 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT034426; NR_103853
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.3593 non-coding 
CPAT coding probability 9.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDNRB-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLAIN1-1:3
4.0 EDNRB-AS1:2
4.1 EDNRB-AS1:2
5.0 EDNRB-AS1:2
5.1 EDNRB-AS1:2
5.2 EDNRB-AS1:2