Transcript: EDRF1-AS1:13

Basic information

LNCipedia transcript ID: EDRF1-AS1:13 
LNCipedia gene ID: EDRF1-AS1
RefSeq ID: NR_120633
Location (hg19): chr10:127433296-127440629
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120633; NR_120633.1
Alternative gene names: ; EDRF1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -208.1217 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:13 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMP21-1:8
4.0 EDRF1-AS1:13
4.1 EDRF1-AS1:13
5.0 EDRF1-AS1:13
5.1 EDRF1-AS1:13
5.2 EDRF1-AS1:13