Transcript: EDRF1-AS1:16

Basic information

LNCipedia transcript ID: EDRF1-AS1:16 
LNCipedia gene ID: EDRF1-AS1
Ensembl Gene ID: ENSG00000280561
Ensembl Transcript ID: ENST00000625908
Location (hg19): chr10:127395985-127438094
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 565 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625908.1
Alternative gene names: ENSG00000280561.1; RP11-383C5.8; ; AL158835.3; AL158835.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -145.333 non-coding 
CPAT coding probability 4.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 EDRF1-AS1:16
4.1 EDRF1-AS1:16
5.0 EDRF1-AS1:16
5.1 EDRF1-AS1:16
5.2 EDRF1-AS1:16