Transcript: EDRF1-AS1:32

Basic information

LNCipedia transcript ID: EDRF1-AS1:32 
LNCipedia gene ID: EDRF1-AS1
Location (hg19): chr10:127389019-127398158
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 706 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018629; NONHSAT016895
Alternative gene names: XLOC_008982; linc-C10orf122-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.333 non-coding 
CPAT coding probability 16.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:32 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf122-1:5
3.1 lnc-C10orf122-1:10
4.0 EDRF1-AS1:32
4.1 EDRF1-AS1:32
5.0 EDRF1-AS1:32
5.1 EDRF1-AS1:32
5.2 EDRF1-AS1:32