Transcript: EDRF1-AS1:33

Basic information

LNCipedia transcript ID: EDRF1-AS1:33 
LNCipedia gene ID: EDRF1-AS1
Location (hg19): chr10:127378994-127398019
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1247 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_402_chr10:127378993-127388129_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4726 non-coding 
CPAT coding probability 4.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf122-1:16
4.0 EDRF1-AS1:33
4.1 EDRF1-AS1:33
5.0 EDRF1-AS1:33
5.1 EDRF1-AS1:33
5.2 EDRF1-AS1:33