Transcript: EDRF1-AS1:37

Basic information

LNCipedia transcript ID: EDRF1-AS1:37 
LNCipedia gene ID: EDRF1-AS1
Location (hg19): chr10:127389006-127396253
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 579 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000601555.1
Alternative gene names: ENSG00000224023.6; RP11-383C5.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.333 non-coding 
CPAT coding probability 16.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:37 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf122-1:17
4.0 EDRF1-AS1:37
4.1 EDRF1-AS1:37
5.0 EDRF1-AS1:37
5.1 EDRF1-AS1:37
5.2 EDRF1-AS1:37