Transcript: EIF1B-AS1:2

Basic information

LNCipedia transcript ID: EIF1B-AS1:2 
LNCipedia gene ID: EIF1B-AS1
Ensembl Gene ID: ENSG00000280739
Ensembl Transcript ID: ENST00000631175
Location (hg19): chr3:40283686-40351189
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1303 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631175.2
Alternative gene names: ENSG00000280739.2; EIF1B-AS1; FLJ33065


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.0266 non-coding 
CPAT coding probability 24.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EIF1B-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 EIF1B-AS1:2
4.1 EIF1B-AS1:2
5.0 EIF1B-AS1:2
5.1 EIF1B-AS1:2
5.2 EIF1B-AS1:2