Transcript: ELFN1-AS1:9

Basic information

LNCipedia transcript ID: ELFN1-AS1:9 
LNCipedia gene ID: ELFN1-AS1
Location (hg19): chr7:1778619-1781916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 625 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236081.1|ENST00000415399.1
Alternative gene names: MYCLo-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 7.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ELFN1-AS1:9 no no no no

Available literature

  1. Kim (2015), Role of MYC-regulated long noncoding RNAs in cell cycle regulation and tumorigenesis., J. Natl. Cancer Inst.
  2. Polev (2014), ELFN1-AS1: a novel primate gene with possible microRNA function expressed predominantly in human tumors., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ELFN1-AS1:9
5.0 ELFN1-AS1:9
5.1 ELFN1-AS1:9
5.2 ELFN1-AS1:9