Transcript: ELN-AS1:6

Basic information

LNCipedia transcript ID: ELN-AS1:6 
HGNC Gene Symbol: ELN-AS1    
HGNC Full Gene Name: ELN antisense RNA 1
Ensembl Gene ID: ENSG00000232415
Ensembl Transcript ID: ENST00000435932
Location (hg19): chr7:73473906-73476614
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 532 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000435932.1; CTB-51J22.1-001; OTTHUMT00000348282.1; NONHSAT121447
Alternative gene names: ENSG00000232415.1; CTB-51J22.1; OTTHUMG00000157272.1; AC005056.1; ELN-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 112.702 coding 
CPAT coding probability 19.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ELN-AS1:6 no no no no

Available literature

  1. Sun (2017), Identification of long non-coding RNAs biomarkers associated with progression of endometrial carcinoma and patient outcomes., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RFC2-2:1
4.0 lnc-RFC2-2:1
4.1 lnc-RFC2-2:1
5.0 lnc-RFC2-2:1
5.1 ELN-AS1:3
5.2 ELN-AS1:6