Transcript: EPHA1-AS1:4

Basic information

LNCipedia transcript ID: EPHA1-AS1:4 
LNCipedia gene ID: EPHA1-AS1
Location (hg19): chr7:143112149-143112912
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 615 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT123874; FPKM1_group_30554_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -182.0777 non-coding 
CPAT coding probability 15.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EPHA1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZYX-1:4
4.0 EPHA1-AS1:4
4.1 EPHA1-AS1:4
5.0 EPHA1-AS1:4
5.1 EPHA1-AS1:4
5.2 EPHA1-AS1:4