Transcript: EPHA5-AS1:12

Basic information

LNCipedia transcript ID: EPHA5-AS1:12 
LNCipedia gene ID: EPHA5-AS1
Location (hg19): chr4:66567826-66572529
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1817 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT096667; FPKM1_group_23422_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -67.1335 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EPHA5-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STAP1-5:2
4.0 lnc-STAP1-5:2
4.1 EPHA5-AS1:12
5.0 EPHA5-AS1:12
5.1 EPHA5-AS1:12
5.2 EPHA5-AS1:12