Transcript: ERICD:5

Basic information

LNCipedia transcript ID: ERICD:5 
LNCipedia gene ID: ERICD
Location (hg19): chr8:141646079-141648287
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2209 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1336:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.021 non-coding 
CPAT coding probability 10.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ERICD:5 no no no no

Available literature

  1. Feldstein (2013), The long non-coding RNA ERIC is regulated by E2F and modulates the cellular response to DNA damage., Mol. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CHRAC1-2:2
4.1 lnc-CHRAC1-2:2
5.0 lnc-CHRAC1-2:2
5.1 ERICD:2
5.2 ERICD:5