Transcript: ESRG:2

Basic information

LNCipedia transcript ID: ESRG:2 
LNCipedia gene ID: ESRG
RefSeq ID: NR_027122
Location (hg19): chr3:54666151-54673884
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3138 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027122; NR_027122.1
Alternative gene names: HESRG; ESRG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.3704 non-coding 
CPAT coding probability 6.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ESRG:2 yes no no no

Available literature

  1. Wanggou (2012), HESRG: a novel biomarker for intracranial germinoma and embryonal carcinoma., J. Neurooncol.
  2. Zhao (2007), Transcriptional profiling of human embryonic stem cells and embryoid bodies identifies HESRG, a novel stem cell gene., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRTM1-3:2
4.0 ESRG:2
4.1 ESRG:2
5.0 ESRG:2
5.1 ESRG:2
5.2 ESRG:2