Transcript: EVX1-AS:5

Basic information

LNCipedia transcript ID: EVX1-AS:5 
LNCipedia gene ID: EVX1-AS
Ensembl Gene ID: ENSG00000253308
Ensembl Transcript ID: ENST00000523608
Location (hg19): chr7:27278862-27280847
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 757 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523608.2; RP1-170O19.17-001; OTTHUMT00000358745.3; NONHSAT119722
Alternative gene names: ENSG00000253308.2; RP1-170O19.17; OTTHUMG00000159990.3; EVX1-AS1; AC004080.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -378.6738 non-coding 
CPAT coding probability 10.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EVX1-AS:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-170O19.17.1-1:1
4.0 EVX1-AS:5
4.1 EVX1-AS:5
5.0 EVX1-AS:5
5.1 EVX1-AS:5
5.2 EVX1-AS:5