Transcript: F11-AS1:7

Basic information

LNCipedia transcript ID: F11-AS1:7 
LNCipedia gene ID: F11-AS1
RefSeq ID: NR_033901
Location (hg19): chr4:187337202-187422212
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1861 bp
Exons: 7
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033901.2
Alternative gene names: F11-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.32 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
F11-AS1:7 yes no no no

Available literature

  1. Yu (2017), Analysis of distinct long noncoding RNA transcriptional fingerprints in pancreatic ductal adenocarcinoma., Cancer Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 F11-AS1:7
5.1 F11-AS1:7
5.2 F11-AS1:7