Transcript: FALEC:2
Basic information
LNCipedia transcript ID: FALEC:2
HGNC Gene Symbol: FALEC
HGNC Full Gene Name:
focally amplified long non-coding RNA in epithelial cancer
Ensembl Gene ID:
ENSG00000228126
Ensembl Transcript ID:
ENST00000416894
RefSeq ID:
NR_051960
Location (hg19): chr1:150488233-150490508
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 566 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; long non-coding rna db - lncrnadb.com; Ensembl release 83 - Dec 2015; Ensembl release 75 - Feb 2014; NONCODE v4; Refseq - Dec 2014; Ensembl release 64 - Sep 2011; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_051960; LINC00568-001; ENST00000416894.1; ENST00000416894; NONHSAT006301; LINC00568; OTTHUMT00000087261.1; NR_051960.1
Alternative gene names: Noncoding RNA activating1: ncRNA-a1; FALEC; OTTHUMG00000035849.1; ENSG00000228126.1; LINC00568; ENSG00000228126; RP11-54A4.8; ncRNA-a1; FAL1
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
FALEC:2 | no | no | no | no |
Available literature
- Hu (2014), A functional genomic approach identifies FAL1 as an oncogenic long noncoding RNA that associates with BMI1 and represses p21 expression in cancer., Cancer Cell
- Ørom (2010), Long noncoding RNAs with enhancer-like function in human cells., Cell
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-ECM1-1:1 |
3.1 | lnc-ECM1-1:1 |
4.0 | FALEC:2 |
4.1 | FALEC:2 |
5.0 | FALEC:2 |
5.1 | FALEC:2 |
5.2 | FALEC:2 |