Transcript: FAM111A-DT:10

Basic information

LNCipedia transcript ID: FAM111A-DT:10 
LNCipedia gene ID: FAM111A-DT
RefSeq ID: NR_110184
Location (hg19): chr11:58901445-58910281
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2247 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110184.1
Alternative gene names: LOC101927204


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.717 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM111A-DT:10 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 FAM111A-DT:10
5.1 FAM111A-DT:10
5.2 FAM111A-DT:10