Transcript: FAM111A-DT:32

Basic information

LNCipedia transcript ID: FAM111A-DT:32 
LNCipedia gene ID: FAM111A-DT
Location (hg19): chr11:58897603-58903760
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6158 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA264:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.6653 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM111A-DT:32 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MPEG1-2:10
4.1 lnc-MPEG1-2:10
5.0 lnc-MPEG1-2:10
5.1 FAM111A-DT:16
5.2 FAM111A-DT:32