Transcript: FAM182A:27

Basic information

LNCipedia transcript ID: FAM182A:27 
LNCipedia gene ID: FAM182A
Location (hg19): chr20:25990414-26001708
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052963.1|ENCT00000260278.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.0215 non-coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM182A:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM182A-4:13
5.0 lnc-FAM182A-4:13
5.1 FAM182A:6
5.2 FAM182A:27