Transcript: FAM182A:30

Basic information

LNCipedia transcript ID: FAM182A:30 
LNCipedia gene ID: FAM182A
Location (hg19): chr20:25990432-25999995
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 459 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA839:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 31.5702 non-coding 
CPAT coding probability 42.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM182A:30 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM182A-6:6
4.1 lnc-FAM182A-4:15
5.0 lnc-FAM182A-4:15
5.1 FAM182A:9
5.2 FAM182A:30