Transcript: FAM182A:36

Basic information

LNCipedia transcript ID: FAM182A:36 
LNCipedia gene ID: FAM182A
RefSeq ID: NR_026713
Location (hg19): chr20:26035250-26067553
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5111 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT079212; NR_026713; NR_026713.1
Alternative gene names: FAM182A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.6551 non-coding 
CPAT coding probability 57.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM182A:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM182A-4:1
4.0 lnc-FAM182A-4:1
4.1 lnc-FAM182A-4:1
5.0 lnc-FAM182A-4:1
5.1 FAM182A:16
5.2 FAM182A:36