Transcript: FAM201A:2

Basic information

LNCipedia transcript ID: FAM201A:2 
HGNC Gene Symbol: FAM201A    
HGNC Full Gene Name: family with sequence similarity 201 member A
Ensembl Gene ID: ENSG00000204860
Ensembl Transcript ID: ENST00000484285
Location (hg19): chr9:38620731-38623281
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1742 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131184; ENST00000484285.2
Alternative gene names: ENSG00000204860.4; FAM201A;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 103.6434 coding 
CPAT coding probability 17.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM201A:2 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM201A-4:2
4.0 FAM201A:2
4.1 FAM201A:2
5.0 FAM201A:2
5.1 FAM201A:2
5.2 FAM201A:2