Transcript: FAM223A:3

Basic information

LNCipedia transcript ID: FAM223A:3 
HGNC Gene Symbol: FAM223A    
HGNC Full Gene Name: family with sequence similarity 223 member A
Ensembl Gene ID: ENSG00000279245
Ensembl Transcript ID: ENST00000625204
RefSeq ID: NR_027401
Location (hg19): chrX:153799479-153800191
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 713 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000625204.1; NR_027401.2
Alternative gene names: ENSG00000279245.1; FAM223A; SPCX


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.5616 non-coding 
CPAT coding probability 30.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM223A:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FAM223A:3
4.1 FAM223A:3
5.0 FAM223A:3
5.1 FAM223A:3
5.2 FAM223A:3