Transcript: FAM230B:10

Basic information

LNCipedia transcript ID: FAM230B:10 
LNCipedia gene ID: FAM230B
Location (hg19): chr22:21537664-21656970
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1639 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000440315.3
Alternative gene names: ENSG00000215498.8; FAM230B; FLJ46366


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.58 non-coding 
CPAT coding probability 99.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM230B:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FAM230B:10
4.1 FAM230B:10
5.0 FAM230B:10
5.1 FAM230B:10
5.2 FAM230B:10