Transcript: FAM95B1:14

Basic information

LNCipedia transcript ID: FAM95B1:14 
HGNC Gene Symbol: FAM95B1    
HGNC Full Gene Name: family with sequence similarity 95 member B1
Ensembl Gene ID: ENSG00000223839
Ensembl Transcript ID: ENST00000590254
Location (hg19): chr9:42468743-42470655
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 663 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131306; ENST00000590254.1
Alternative gene names: ENSG00000223839.3; FAM95B1; ENSG00000223839.7; DKFZp686P0734


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.1428 non-coding 
CPAT coding probability 17.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM95B1:14 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Wang (2015), The long noncoding RNA LINC01207 promotes proliferation of lung adenocarcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD20A2-1:9
4.0 FAM95B1:14
4.1 FAM95B1:14
5.0 FAM95B1:14
5.1 FAM95B1:14
5.2 FAM95B1:14