Transcript: FAM99B:6

Basic information

LNCipedia transcript ID: FAM99B:6 
LNCipedia gene ID: FAM99B
Location (hg19): chr11:1704499-1706875
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1083 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205865.4|ENST00000382166.2
Alternative gene names: DKFZp781M09150


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.8893 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM99B:6 no no no no

Available literature

  1. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 FAM99B:6
5.0 FAM99B:6
5.1 FAM99B:6
5.2 FAM99B:6