Transcript: FEZF1-AS1:12

Basic information

LNCipedia transcript ID: FEZF1-AS1:12 
LNCipedia gene ID: FEZF1-AS1
Ensembl Gene ID: ENSG00000234418
Ensembl Transcript ID: ENST00000446053
Location (hg19): chr7:121856401-121858491
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 472 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013068; ENST00000446053; ENST00000446053.1; RP11-560I19.1-001; OTTHUMT00000347423.1; NONHSAT123023
Alternative gene names: XLOC_006220; linc-ASB15-4; ENSG00000234418; RP11-560I19.1; ENSG00000234418.1; OTTHUMG00000157098.1; ; AC015983.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -65.7617 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FEZF1-AS1:12 no no no no

Available literature

  1. Li (2018), Long non-coding RNA FEZF1-AS1 promotes cell growth in multiple myeloma via miR-610/Akt3 axis., Biomed. Pharmacother.
  2. Liu (2017), LincRNAFEZF1-AS1 represses p21 expression to promote gastric cancer proliferation through LSD1-Mediated H3K4me2 demethylation., Mol. Cancer
  3. Chen (2016), Long non-coding RNA FEZF1-AS1 facilitates cell proliferation and migration in colorectal carcinoma., Oncotarget
  4. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PTPRZ1-1:1
3.1 lnc-PTPRZ1-1:1
4.0 lnc-PTPRZ1-1:1
4.1 FEZF1-AS1:12
5.0 FEZF1-AS1:12
5.1 FEZF1-AS1:12
5.2 FEZF1-AS1:12