Transcript: FEZF1-AS1:3

Basic information

LNCipedia transcript ID: FEZF1-AS1:3 
HGNC Gene Symbol: FEZF1-AS1    
HGNC Full Gene Name: FEZF1 antisense RNA 1
Ensembl Gene ID: ENSG00000230316
Ensembl Transcript ID: ENST00000437317
Location (hg19): chr7:121945004-121945871
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 768 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437317.1; RP11-560I19.4-002; OTTHUMT00000347418.1; NONHSAT123028
Alternative gene names: ENSG00000230316.2; RP11-560I19.4; OTTHUMG00000157095.1; FEZF1-AS1; ENSG00000230316.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.2121 non-coding 
CPAT coding probability 5.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FEZF1-AS1:3 yes no no no

Available literature

  1. Li (2018), Long non-coding RNA FEZF1-AS1 promotes cell growth in multiple myeloma via miR-610/Akt3 axis., Biomed. Pharmacother.
  2. Liu (2017), LincRNAFEZF1-AS1 represses p21 expression to promote gastric cancer proliferation through LSD1-Mediated H3K4me2 demethylation., Mol. Cancer
  3. Chen (2016), Long non-coding RNA FEZF1-AS1 facilitates cell proliferation and migration in colorectal carcinoma., Oncotarget
  4. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPRZ1-2:2
4.0 FEZF1-AS1:3
4.1 FEZF1-AS1:3
5.0 FEZF1-AS1:3
5.1 FEZF1-AS1:3
5.2 FEZF1-AS1:3