Transcript: FGF14-IT1:2

Basic information

LNCipedia transcript ID: FGF14-IT1:2 
LNCipedia gene ID: FGF14-IT1
Location (hg19): chr13:102945286-103054799
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 860 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000418923.1; FGF14-IT1-001; OTTHUMT00000045675.1; NONHSAT034996
Alternative gene names: ENSG00000243319.1; FGF14-IT1; OTTHUMG00000017301.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.4314 non-coding 
CPAT coding probability 3.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF14-IT1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL21C-2:1
4.0 FGF14-IT1:2
4.1 FGF14-IT1:2
5.0 FGF14-IT1:2
5.1 FGF14-IT1:2
5.2 FGF14-IT1:2