Transcript: FGF14-IT1:4

Basic information

LNCipedia transcript ID: FGF14-IT1:4 
HGNC Gene Symbol: FGF14-IT1    
HGNC Full Gene Name: FGF14 intronic transcript 1
Ensembl Gene ID: ENSG00000243319
Ensembl Transcript ID: ENST00000607251
Location (hg19): chr13:102944677-103046869
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2123 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607251.1; ENST00000607251.5
Alternative gene names: ENSG00000243319.3; FGF14-IT1; ENSG00000243319.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.8121 non-coding 
CPAT coding probability 2.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF14-IT1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL21C-2:4
4.0 FGF14-IT1:4
4.1 FGF14-IT1:4
5.0 FGF14-IT1:4
5.1 FGF14-IT1:4
5.2 FGF14-IT1:4